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J Gen Virol 77 (1996), 481-484; DOI 10.1099/0022-1317-77-3-481
© 1996 Society for General Microbiology

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The herpes simplex virus type 2 strain HG52 RL1 gene contains a 154 bp intron as predicted from sequence analysis

June E. Harland1, Salwa Bdour2, S. Moira Brown1 and Alasdair R. MacLean2,3,*

1 MRC Virology Unit
and2 Division of Virology, Institute of Virology, Church Street, Glasgow G11 5JR
and3 Department of Neurology, Southern General Hospital, University of Glasgow, Glasgow, UK

The published sequence of the herpes simplex virus (HSV) type 2 strain HG52 neurovirulence gene RL1 indicated that, unlike the HSV-1 homologue, the gene contains a 154 bp intron. This intron contains six complete and one partial copy of a 19 bp repeat which encodes a stop codon; thus all three forward frames are blocked. By RT-PCR of poly(A)+ RNA, using primers on either side of the proposed intron, we have isolated a partial cDNA clone corresponding to the predicted spliced mRNA.

* Author for correspondence. Fax +44 141 337 2236. e-mail MACLOIA@vir.gla.ac.uk

Received 11 October 1995; accepted 15 November 1995.


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A. Dolan, F. E. Jamieson, C. Cunningham, B. C. Barnett, and D. J. McGeoch
The Genome Sequence of Herpes Simplex Virus Type 2
J. Virol., March 1, 1998; 72(3): 2010 - 2021.
[Abstract] [Full Text] [PDF]




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