|
|
||||||||
1 Department of Virology and Medicity Research Laboratory, University of Turku, Tykistökatu 6A, FIN-20520 Turku
and2 Enterovirus Laboratory, National Public Health Institute, Mannerheimintie 166, FIN-00300 Helsinki, Finland
In order to determine the overall molecular heterogeneity of echoviruses (EVs) we performed a genetic analysis of the prototype strains. Nucleotide and derived amino acid sequences from different genomic regions (5'UTR, capsid protein-coding and 3D polymerase genes) were used for molecular comparisons. On the basis of a comparison of partial amino acid sequences from the capsid protein VP2, all the sequenced EVs excluding EV22 and EV23 form a single cluster which is genetically homogeneous. All previously sequenced coxsackie B viruses (CBVs) and coxsackievirus A9 also belong to this same genetic cluster. Similar results were obtained when the 5'UTR or 3D polymerase gene sequences were used in comparisons. When amino acid sequences of the major capsid proteins of EV1 and EV16 were compared to those of previously sequenced enteroviruses, the length of the loops connecting the
-sheets appeared to be relatively constant in the EV/CBV cluster. It can be concluded that EVs and CBVs have diverged relatively late in evolution.
* Author for correspondence. Fax +358 21 6337000. e-mail pasi.huttunen@utu.fi
Received 20 July 1995;
accepted 8 December 1995.
This article has been cited by other articles:
![]() |
C. Savolainen, P. Laine, M. N. Mulders, and T. Hovi Sequence analysis of human rhinoviruses in the RNA-dependent RNA polymerase coding region reveals large within-species variation J. Gen. Virol., August 1, 2004; 85(8): 2271 - 2277. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. S. Oberste, S. Penaranda, and M. A. Pallansch RNA Recombination Plays a Major Role in Genomic Change during Circulation of Coxsackie B Viruses J. Virol., March 15, 2004; 78(6): 2948 - 2955. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. A. Hughes, H. M. Thaker, and V. R. Racaniello Transgenic mouse model for echovirus myocarditis and paralysis PNAS, December 23, 2003; 100(26): 15906 - 15911. [Abstract] [Full Text] [PDF] |
||||
![]() |
B. Brown, M. S. Oberste, K. Maher, and M. A. Pallansch Complete Genomic Sequencing Shows that Polioviruses and Members of Human Enterovirus Species C Are Closely Related in the Noncapsid Coding Region J. Virol., August 15, 2003; 77(16): 8973 - 8984. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Norder, L. Bjerregaard, L. Magnius, B. Lina, M. Aymard, and J.-J. Chomel Sequencing of 'untypable' enteroviruses reveals two new types, EV-77 and EV-78, within human enterovirus type B and substitutions in the BC loop of the VP1 protein for known types J. Gen. Virol., April 1, 2003; 84(4): 827 - 836. [Abstract] [Full Text] [PDF] |
||||
![]() |
G. Oprisan, M. Combiescu, S. Guillot, V. Caro, A. Combiescu, F. Delpeyroux, and R. Crainic Natural genetic recombination between co-circulating heterotypic enteroviruses J. Gen. Virol., September 1, 2002; 83(9): 2193 - 2200. [Abstract] [Full Text] [PDF] |
||||
![]() |
M. Costa-Mattioli, J. Cristina, H. Romero, R. Perez-Bercof, D. Casane, R. Colina, L. Garcia, I. Vega, G. Glikman, V. Romanowsky, et al. Molecular Evolution of Hepatitis A Virus: a New Classification Based on the Complete VP1 Protein J. Virol., August 12, 2002; 76(18): 9516 - 9525. [Abstract] [Full Text] [PDF] |
||||
![]() |
H. Norder, L. Bjerregaard, and L. O. Magnius Open reading frame sequence of an Asian enterovirus 73 strain reveals that the prototype from California is recombinant J. Gen. Virol., June 1, 2002; 83(7): 1721 - 1728. [Abstract] [Full Text] [PDF] |
||||
![]() |
V. Caro, S. Guillot, F. Delpeyroux, and R. Crainic Molecular strategy for 'serotyping' of human enteroviruses J. Gen. Virol., January 1, 2001; 82(1): 79 - 91. [Abstract] [Full Text] |
||||
![]() |
J. Santti, H. Harvala, L. Kinnunen, and T. Hyypiä Molecular epidemiology and evolution of coxsackievirus A9 J. Gen. Virol., May 1, 2000; 81(5): 1361 - 1372. [Abstract] [Full Text] |
||||
![]() |
M. N. Mulders, M. Salminen, N. Kalkkinen, and T. Hovi Molecular epidemiology of coxsackievirus B4 and disclosure of the correct VP1/2Apro cleavage site: evidence for high genomic diversity and long-term endemicity of distinct genotypes J. Gen. Virol., March 1, 2000; 81(3): 803 - 812. [Abstract] [Full Text] |
||||
![]() |
M. S. Oberste, K. Maher, M. R. Flemister, G. Marchetti, D. R. Kilpatrick, and M. A. Pallansch Comparison of Classic and Molecular Approaches for the Identification of Untypeable Enteroviruses J. Clin. Microbiol., March 1, 2000; 38(3): 1170 - 1174. [Abstract] [Full Text] |
||||
![]() |
J. Santti, T. Hyypia, L. Kinnunen, and M. Salminen Evidence of Recombination among Enteroviruses J. Virol., October 1, 1999; 73(10): 8741 - 8749. [Abstract] [Full Text] [PDF] |
||||
![]() |
G. Stanway and T. Hyypiä Parechoviruses J. Virol., July 1, 1999; 73(7): 5249 - 5254. [Full Text] |
||||
![]() |
M. S. Oberste, K. Maher, D. R. Kilpatrick, M. R. Flemister, B. A. Brown, and M. A. Pallansch Typing of Human Enteroviruses by Partial Sequencing of VP1 J. Clin. Microbiol., May 1, 1999; 37(5): 1288 - 1293. [Abstract] [Full Text] |
||||
![]() |
M. S. Oberste, K. Maher, D. R. Kilpatrick, and M. A. Pallansch Molecular Evolution of the Human Enteroviruses: Correlation of Serotype with VP1 Sequence and Application to Picornavirus Classification J. Virol., March 1, 1999; 73(3): 1941 - 1948. [Abstract] [Full Text] |
||||
![]() |
G. J. J. Van Doornum and J. C. De Jong Rapid Shell Vial Culture Technique for Detection of Enteroviruses and Adenoviruses in Fecal Specimens: Comparison with Conventional Virus Isolation Method J. Clin. Microbiol., October 1, 1998; 36(10): 2865 - 2868. [Abstract] [Full Text] |
||||
![]() |
K. E. van Vliet, M. Glimåker, P. Lebon, P. E. Klapper, C. E. Taylor, M. Ciardi, H. G. A. M. van der Avoort, R. J. A. Diepersloot, J. Kurtz, M. F. Peeters, et al. Multicenter Evaluation of the Amplicor Enterovirus PCR Test with Cerebrospinal Fluid from Patients with Aseptic Meningitis J. Clin. Microbiol., September 1, 1998; 36(9): 2652 - 2657. [Abstract] [Full Text] |
||||
![]() |
P. Muir, U. Kammerer, K. Korn, M. N. Mulders, T. Poyry, B. Weissbrich, R. Kandolf, G. M. Cleator, and A. M. van Loon Molecular Typing of Enteroviruses: Current Status and Future Requirements Clin. Microbiol. Rev., January 1, 1998; 11(1): 202 - 227. [Abstract] [Full Text] [PDF] |
||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| INT J SYST EVOL MICROBIOL | MICROBIOLOGY | J GEN VIROL |
| J MED MICROBIOL | ALL SGM JOURNALS | |