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J Gen Virol 84 (2003), 447-452; DOI 10.1099/vir.0.18773-0

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© 2003 Society for General Microbiology

Short Communication

Insertion of cellular sequence and RNA recombination in the structural protein coding region of cytopathogenic bovine viral diarrhoea virus

Makoto Nagai1, Yoshihiro Sakoda2, Masashi Mori3, Michiko Hayashi1, Hiroshi Kida2 and Hiroomi Akashi4,{dagger}

1 Ishikawa Nanbu Livestock Hygiene Service Center, Kanazawa, Ishikawa 920-3101, Japan
2 Laboratory of Microbiology, Department of Disease Control, Graduate School of Veterinary Medicine, Hokkaido University, Sapporo 060-0818, Japan
3 Laboratory of Plant Molecular Genetics Research Institute of Agricultural Resources, Ishikawa Agricultural College, Ishikawa 921-8836, Japan
4 National Institute of Animal Health, Kannondai, Tsukuba, Ibaraki 305-0856, Japan

Correspondence
Hiroomi Akashi
akashih{at}mail.ecc.u-tokyo.ac.jp

The cytopathogenic bovine viral diarrhoea virus (cp BVDV) strain KS86-1cp was isolated from a calf persistently infected with the noncytopathogenic (ncp) strain KS86-1ncp after it was exposed to cp BVDV strain Nose and developed mucosal disease (MD). Molecular analysis revealed that an insertion of a cellular gene and a duplication of the viral RNA encoding the nucleocapsid protein C and part of Npro had occurred in the C coding region of the Nose and KS86-1cp genomes. The inserted cellular gene was closely related to the cINS sequence. Remarkably, the 5' upstream region from the insertion of KS86-1cp had high sequence identity to that of Nose, but differed from that of KS86-1ncp. In contrast, the region downstream from the insertion of KS86-1cp showed high identity to KS86-1ncp, but not to Nose. These data reveal that KS86-1cp is a chimeric virus generated by homologous RNA recombination in a calf with MD.

{dagger}Present address: Department of Veterinary Microbiology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo 113-8657, Japan.




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