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J Gen Virol 85 (2004), 2799-2807; DOI 10.1099/vir.0.80225-0

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© 2004 Society for General Microbiology

Analysis of the first complete genome sequence of an Old World monkey adenovirus reveals a lineage distinct from the six human adenovirus species

Gábor M. Kovács1, Andrew J. Davison2, Alexender N. Zakhartchouk3 and Balázs Harrach1

1 Veterinary Medical Research Institute, Hungarian Academy of Sciences, PO Box 18, H-1581 Budapest, Hungary
2 MRC Virology Unit, Institute of Virology, Church Street, Glasgow G11 5JR, UK
3 Vaccine and Infectious Disease Organization, University of Saskatchewan, Saskatoon, Saskatchewan, Canada S7N 5E3

Correspondence
Gábor M. Kovács
gkovacs{at}vmri.hu

Simian adenovirus 3 (SAdV-3) is one of several adenoviruses that were isolated decades ago from Old World monkeys. Determination of the complete DNA sequence of SAdV-3 permitted the first full genomic comparison of a monkey adenovirus with adenoviruses of humans (HAdVs) and chimpanzees, which are recognized formally as constituting six of the species (HAdV-A to HAdV-F) within the genus Mastadenovirus. The SAdV-3 genome is 34 246 bp in size and has a G+C content of 55·3 mol%. It contains all the genes that are characteristic of the genus Mastadenovirus and has a single VA-RNA gene and six genes in each of the E3 and E4 regions. The genetic organization is the same as that of HAdV-12, a member of the HAdV-A species. Phylogenetic analyses showed that although SAdV-3 is related marginally more closely to HAdV-A and HAdV-F than to other species, it represents a unique lineage that branched at an early stage of primate adenovirus divergence. The results imply that the genetic layout in SAdV-3 and HAdV-12 may also have characterized the common ancestor of all sequenced primate adenoviruses.

The GenBank/EMBL/DDBJ accession number for the SAdV-3 DNA sequence reported in this paper is AY598782. Accession numbers of Third Party Annotations of the HAdV-1, HAdV-7, HAdV-35 and BAdV-1 DNA sequences are BK005234, BK005235, BK005236 and BK005277, respectively.




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