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J Gen Virol 85 (2004), 3647-3652; DOI 10.1099/vir.0.80238-0

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© 2004 Society for General Microbiology

Short Communication

Genetic and antigenic characterization of an atypical pestivirus isolate, a putative member of a novel pestivirus species

Horst Schirrmeier, Günther Strebelow, Klaus Depner, Bernd Hoffmann and Martin Beer

Friedrich-Loeffler-Institut, Institute of Diagnostic Virology, Boddenblick 5a, 17493 Greifswald-Insel Riems, Germany

Correspondence
Martin Beer
beer{at}rie.bfav.de

The genus Pestivirus within the family Flaviviridae currently consists of four different main species: Classical swine fever virus, Bovine viral diarrhea virus types 1 and 2 and Border disease virus. A fifth tentative species is represented by an isolate from a giraffe. In this study, a completely new pestivirus, isolated from a batch of fetal calf serum that was collected in Brazil, is described. It is proposed that the isolate D32/00_‘HoBi’ may constitute a novel sixth pestivirus species, because it is genetically, as well as antigenically, markedly different from all other pestiviruses. Based on the entire Npro- and E2-encoding sequences, identities of <70 % to all other pestivirus species were determined. Similarly, cross-neutralization and binding studies using antisera and mAbs revealed marked antigenic differences between D32/00_‘HoBi’ and all other pestiviruses.

The GenBank/EMBL/DDBJ accession numbers for the 5'-UTR, Npro, E2, NS3 and 3'-UTR sequences of isolate D32/00_‘HoBi’ reported in this paper are AY489116, AY489117, AY604725, AY713481 and AY604726, respectively.




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T. B. Rasmussen, A. Uttenthal, I. Reimann, J. Nielsen, K. Depner, and M. Beer
Virulence, immunogenicity and vaccine properties of a novel chimeric pestivirus
J. Gen. Virol., February 1, 2007; 88(2): 481 - 486.
[Abstract] [Full Text] [PDF]




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