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J Gen Virol 85 (2004), 1145-1151; DOI 10.1099/vir.0.19638-0

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© 2004 Society for General Microbiology

Sequence analysis and genomic organization of a new insect picorna-like virus, Ectropis obliqua picorna-like virus, isolated from Ectropis obliqua

Xiaochun Wang, Jiamin Zhang, Jie Lu, Fuming Yi, Chuanfeng Liu and Yuanyang Hu

Laboratory of Insect Virology, College of Life Sciences, Wuhan University, Wuhan, Hubei Province 430072, China

Correspondence
Yuanyang Hu
yyhu{at}whu.edu.cn

The complete nucleotide sequence of a new insect picorna-like virus, Ectropis obliqua picorna-like virus (EoPV), which causes a fatal infection of Ectropis obliqua larvae, has been determined. The genomic RNA of EoPV is 9394 nt in length and contains a single, large open reading frame (nt 391–9351) encoding a polyprotein of 2987 aa. Sequence comparisons with other viral polyproteins revealed that the consensus sequences for picornavirus RNA helicase, protease and RNA-dependent RNA polymerase proteins are found on the genome in order in the 5'->3' direction. All structural genes were located at the 5' terminus. In terms of sequence similarity, identity and genome organization, EoPV resembles mammalian picornaviruses and three other insect picorna-like viruses: Infectious flacherie virus of silkworm, Sacbrood virus of honeybee and Perina nuda picorna-like virus (PnPV). Phylogenetic analysis showed that EoPV is most closely related to PnPV and suggests that these four insect picorna-like viruses might constitute a new group of insect-infectious RNA viruses.




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