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1 College of Marine Science, University of South Florida;
2 Kansas City Zoo;
3 Marine Mammal Center
4 E-mail: mya{at}marine.usf.edu
Viral metagenomics was performed to investigate potential viral pathogens associated with a mortality event of three captive California sea lions (Zalophus californianus). This study identified a novel California sea lion anellovirus (ZcAV), with 35% amino acid identity to feline anelloviruses in the ORF1 region. The double-stranded replicative form of ZcAV was detected in lung tissue, suggesting that ZcAV replicates in sea lion lungs. Specific PCR revealed the presence of ZcAV in the lung tissue of all three sea lions involved in the mortality event, but not in three other sea lions from the same zoo. In addition, ZcAV was detected at low frequency (11%) in the lungs of free-living sea lions. The higher prevalence of ZcAV and presence of the double-stranded replicative form in the lungs of sea lions from the mortality event suggest that ZcAV was associated with the death of these animals.
Received 20 November 2008;
accepted 15 January 2009.
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