| GI | NCBI Taxon | Name | Abbreviation |
| 61010 | 36361 | Pygmy chimpanzee papillomavirus | PCPV |
| 9629720 | 203549 | Common chimpanzee papillomavirus | CHPV |
| 9628445 | 10570 | Rhesus monkey papillomavirus | RHPV |
| 9627196 | 10623 | Cottontail rabbit papillomavirus | CRPV |
| 9635132 | 122291 | Rabbit oral papillomavirus | ROPV |
| 9627734 | 35258 | Canine oral papillomavirus | COPV |
| 30315794 | 181667 | Feline papillomavirus | FdPV |
| 23216976 | 10561 | Bovine papillomavirus type 3 | BPV3 |
| 29742037 | 10562 | Bovine papillomavirus type 4 | BPV4 |
| 333005 | 10559 | Bovine papillomavirus type 1 | BPV1 |
| 9627045 | 10560 | Bovine papillomavirus type 2 | BPV2 |
| 23217014 | 40537 | Bovine papillomavirus type 5 | BPV5 |
| 18138516 | 82676 | Phocoena spinipinnis papillomavirus | PsPV |
| 23217032 | 223943 | Equine papillomaviruses | EQPV |
| 9627486 | 10567 | Multimammate rat papillomavirus | MnPV |
| 9627065 | 10564 | Deer papillomavirus | DPV |
| 23216986 | 10569 | Reindeer papillomavirus | RPV |
| 9627074 | 10565 | European elk papillomavirus | EEPV |
| 9629249 | 56144 | Ovine papillomavirus 1 | OvPV1 |
| 9629251 | 56145 | Ovine papillomavirus 2 | OvPV2 |
| 21844535 | 10577 | Avian papillomavirus fpv-l | FPV |
| 21693250 | 197772 | Psittacus erithacus timneh papillomavirus | PePV |
| 9627155 | 10595 | Human papillomavirus type 51 | HPV51 |
| 9627383 | 10596 | Human papillomavirus type 56 | HPV56 |
| 9633484 | 31552 | Human papillomavirus type 6 | HPV6 |
| 9627389 | 10620 | Human papillomavirus type 7 | HPV7 |
| 9627327 | 10612 | Human papillomavirus type 32 | HPV32 |
| 22138122 | 202251 | Human papillomavirus type 90 | HPV90 |
| 9627100 | 10581 | Human papillomavirus type 16 | HPV16 |
| 9627334 | 10613 | Human papillomavirus type 34 | HPV34 |
| 9626069 | 10582 | Human papillomavirus type 18 | HPV18 |
| 9626032 | 10584 | Human papillomavirus type 2 | HPV2 |
| 9626063 | 10583 | Human papillomavirus type 1 | HPV1 |
| 9628574 | 37116 | Human papillomavirus type 61 | HPV61 |
| 9627145 | 10578 | Human papillomavirus type 5 | HPV5 |
| 13128941 | 150546 | Human papillomavirus type 84 | HPV84 |
| 2911558 | 69986 | Human papillomavirus type 77 | HPV77 |
| 9628478 | 37955 | Human papillomavirus type 23 | HPV23 |