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1 Crucell Holland BV, PO Box 2048, 2301 CA Leiden, The Netherlands
2 Gaubius Laboratory, TNO, 2301 CA Leiden, The Netherlands
3 Department of Human Retrovirology, Academic Medical Center, Amsterdam, The Netherlands
4 Beth Israel Deaconess Medical Center, Harvard Medical School, 330 Brookline Avenue, Boston, MA 02215, USA
5 Department of Surgery, LUMC, Leiden, The Netherlands
Correspondence
Menzo J. E. Havenga
m.havenga{at}crucell.com
| ABSTRACT |
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The GenBank/EMBL/DDBJ accession number of the sequence reported in this paper is DQ393829.
| INTRODUCTION |
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Collectively, the data demonstrate that the novel rAd49 vaccine carrier can be produced to high titres on existing E1-complementing cell lines such as PER.C6, utilizes hCD46 as a receptor and elicits clear antigen-specific CD8+ T-lymphocyte responses in mice in the presence or absence of anti-Ad5 immunity.
| METHODS |
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Primary cells and cell lines.
PER.C6 (Fallaux et al., 1998
) cells were routinely maintained in Dulbecco's modified Eagle medium (DMEM; Gibco-BRL) supplemented with 10 % fetal bovine serum (FBS; Invitrogen) and 10 mM MgCl2. Hamster cell lines CHO-K1, Pro-5 and Lec2 (obtained from the ATCC) were cultured according to instructions provided. The CHO-hCAR cell line was maintained in RPMI supplemented with 10 % FBS. Mouse cell lines B16F10 and B16F10-hCD46 (Verhaagh et al., 2006
) were maintained in DMEM supplemented with 10 % FBS.
Ad49 plasmid system and vector generation.
A similar construction strategy has been applied to generate E1-deleted Ad49 vector as described previously (Holterman et al., 2004
; Vogels et al., 2003
). The plasmid system consisted of an adapter plasmid (pAdApt49) containing the left end of the Ad49 genome with deletion of E1 sequences and a cosmid (pWE.Ad49.
E3.5ORF6) containing 31.5 kb of the Ad49 genome. Plasmid pAdApt49 (nt 1462 of wt Ad49) contained the left inverted terminal repeat (ITR) and the packaging signal, encompassing an expression cassette consisting of the cytomegalovirus promoter linked to a multiple cloning site (MCS) followed by the simian virus 40 poly(A) transcription termination signal, and further containing part of the Ad49 wt genome corresponding to nt 33625909. This latter sequence enables homologous recombination with the Ad49 cosmid in Ad5 E1-complementing cells like PER.C6. Cosmid pWE.Ad49.
E3.5ORF6 contained the Ad49 genome starting from pIX to the right ITR (nt 375035 215), a 4 kb deletion in the E3 region and the Ad5 E4-ORF6 replacing the Ad49 E4-ORF6. To introduce the 4 kb deletion in the E3 region a smaller pBr-based subclone of Ad49, pBr.Ad49.SrfI-rITR, was generated that contained Ad49 nt 15 36435 215. The pBr.Ad49.SrfI-rITR.
E3 plasmid was thereafter constructed by generating two PCR fragments flanking the Ad49 E3 region (nt 25 46126 665 and 30 73633 488). Both PCR fragments contained an artificially introduced AflII restriction site to ligate both PCR fragments. The ligated PCR fragments were subsequently digested with AscI and EcoRI and ligated into an AscIEcoRI digested pBr.Ad49.SrfI-rITR plasmid, thereby deleting 4 kb of the Ad49 E3 region (nt 26 66630 735). The Ad49 E4-ORF6 was thereafter exchanged by the Ad5 E4-ORF6, to enable growth of rAd49 on PER.C6 cells as described previously (Havenga et al., 2006
). Briefly, the sequence from nt 32 257 to 33 389 was replaced by the corresponding sequence of Ad5 by assembling three PCR fragments. The first PCR fragment consisted of 1.5 kb spanning nt 11 34812 882 of pBr.Ad49.SrfI-rITR.
E3 containing a 3' tail homologous to the Ad5 E4-ORF6/7 sequence). A second PCR fragment was obtained by using an Ad5 cosmid clone containing nt 3534 to the right ITR (pWE.Ad5.AflII-rITR; see Vogels et al., 2003
), resulting in a 1.1 kb fragment corresponding to Ad5 sequence nt 32 96334 077 (as in GenBank accession no. M73260
[GenBank]
) and flanked by sequences homologous to the first (3' end) and third (5' end) PCR fragments.
The third PCR fragment of 109 bp encoding the Ad49 E4-ORF4 nt 14 01614 125 of pBr.Ad49.SrfI-rITR.
E3 and having a 5' tail homologous to the second PCR fragment was obtained by using the pBr.Ad49.SrfI-rITR.
E3 plasmid as template. These three PCR fragments were combined by assembly PCR using the two outside primers. The total fragment of the chimeric E4 region (2.8 kb) was cloned into the pBr.Ad49.SrfI-rITR.
E3 using the AflII and EcoRI restriction sites, resulting in pBr.Ad49.SrfI-rITR.
E3.5ORF6. The pWE.Ad49.
E3.5ORF6 cosmid was thereafter obtained by a two-step cloning strategy using Genehogs bacteria (Invitrogen).
Reconstitution of the full-length rAd49 (
E1,
E3, 5ORF6) genome was achieved by homologous recombination via co-transfection of pAdApt49, with either the luciferase (Luc) gene, enhanced green fluorescent protein (eGFP) or SIVmac239 Gag (SIVGag) gene cloned into the MCS, and pWE.Ad49.
E3.5ORF6 in PER.C6 packaging cells using lipofectamine (Invitrogen). Upon transfection and cytopathogenic effect (CPE), rAd49 viruses were plaque purified and further expanded on adherent PER.C6 cells. Purified rAd49 batches were obtained by CsCl gradient centrifugation, and OD260/SDS virus particle determinations were performed.
Determination of neutralizing antibody (NAb) titres.
To determine the NAb titres against wt Ad49 in mouse sera, the wt virus replication inhibition assay was used as described previously (Vogels et al., 2003
). To determine the NAb titres against rAd5 and rAd49, sera from mouse or human origin were heat inactivated for 1 h at 56 °C, followed by the luciferase transgene inhibition detection assay as described previously (Sprangers et al., 2003
). All human sera were obtained after informed consent.
Ad49 tropism studies.
Cell lines were cultured in 24-well plates and exposed to 1000 virus particles (vp) per cell of rAd49.eGFP. Virus exposure was allowed for 2 h at 37 °C, upon which medium was replaced. After 48 h, cells were harvested, washed with PBS/0.5 % BSA, centrifuged and resuspended in cell fix (Becton Dickinson) prior to fluorescence-activated cell sorter (FACS) analysis. To determine
(2
3) sialic acid presence on Pro-5 and Lec2 cells, cells were stained for 30 min with 1 : 100 diluted MAA-lectin-digoxigenin (DIG) (Roche), washed with PBS/0.5 % BSA and thereafter stained for 30 min with anti-DIG-fluorescein isothiocyanate (FITC) (Roche). To analyse for hCAR or hCD46, cells were stained for 30 min with 1 : 25 diluted anti-hCAR (Abcam) or 1 : 50 diluted anti-hCD46 (BioTrend), respectively, washed with PBS/0.5 % BSA and stained for 30 min with goat anti-mouse-FITC (Becton Dickinson). The percentage of cells positive for eGFP or FITC expression was determined by using the FACScalibur (Becton Dickinson) and Cell-Quest Pro software.
Vaccination experiments, SIVGag-specific tetramer-binding studies and ELISPOT.
Six- to eight-week-old C57/BL6 mice were obtained from Harlan B.V. (Zeist, The Netherlands). To induce anti-Ad49 or anti-Ad5 immunity, mice were pre-immunized twice, separated by a 4 week interval, with 1010 vp replication-competent Ad49 or 1010 vp replication-incompetent rAd5-Empty, respectively (total volume 100 µl in the quadriceps muscles). For immunization, mice received (intramuscularly, i.m.) 106, 107, 108, 109 or 1010 vp of replication-incompetent rAd5 or rAd49 (both E1/E3 deleted) expressing SIVGag. Tetrameric H-2Db complexes folded around the immunodominant SIVGag AL11 epitope (AAVKNWMTQTL) (Barouch et al., 2004
) were prepared and utilized to stain peptide-specific CD8+ T lymphocytes as described previously (Altman et al., 1996
; Barouch et al., 2003
). Samples were analysed by two-colour flow cytometry on the FACScalibur (Becton Dickinson) and Cell-Quest Pro software. Gated CD8+ T lymphocytes were examined for staining with the Db/AL11 tetramer. SIVGag-specific cellular immune responses were assessed by gamma interferon (IFN-
) ELISPOT assays as described previously (Barouch et al., 2004
; Sullivan et al., 2003
). Murine splenocytes were assessed for reponses to individual SIVGag epitope peptides AL11 and KV9 (Barouch et al., 2004
) or a pool of overlapping 15 aa peptides covering the entire SIVmac239 Gag protein. Read out was done using an ELISPOT reader (Aelvis).
Statistical analyses.
Tetramer, ELISPOT and cell infection data are shown as mean and standard error of the mean (SEM). Statistical analyses were performed using SPSS version 13. Comparison of tetramer responses between groups of mice were done for day 10 to 28 following immunization by ANOVA, since up to day 10 no change in response was either measured or anticipated. ELISPOT responses among groups of mice were compared by two-tailed t tests after logarithmic transformation. The percentages positive eGFP cells following cell infection were compared by ANOVA using the number of different experiments as co-factor. In all cases, P<0.05 was considered significant.
| RESULTS |
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E1-rAd49 vector plasmid system
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Receptor usage of rAd49 vector
Since studies to date revealed a striking diversity in receptor usage of human group D adenoviruses including CAR, CD46 and
(2
3) sialic acid (Arnberg et al., 2000a
, b
; Roelvink et al., 1996
, 1998
; Wu et al., 2004
), we tested a panel of cell lines either positive or negative for these entry molecules. Hereto, we tested the transduction efficiency of rAd49.eGFP vector in Lec2 and Pro-5 cells that are negative or positive for
(2
3) sialic acid residues, respectively (Fig. 4a
and Stanley & Siminovitch, 1977
). As shown in Fig. 4(b)
, no significant increase in either percentage eGFP-positive cells (40 vs 39 % for Lec2 and Pro-5, respectively, P=0.6 ANOVA tests) or median fluorescence (data not shown) was observed between Lec2 and Pro-5, indicating that
(2
3) sialic acid expression does not contribute to rAd49 transduction. Identical experiments, performed using CHO or CHO cell lines expressing the human coxsackie B adenovirus receptor (hCAR) (Fig. 4c
), also demonstrated that hCAR expression (Fig. 4d
) does not increase rAd49-mediated eGFP expression (36 % for CHO-hCAR and 48 % for CHO). Finally, we tested B16F10 cells and B16F10 cells expressing hCD46 (Fig. 4e
), demonstrating that rAd49-mediated transduction is significantly (P<0.001 ANOVA tests) higher in B16F10-hCD46 (51 %) as compared with B16F10 (15 %), indicating that the BC1 isoform of hCD46 provides a cellular receptor for rAd49 (Fig. 4f
). However, rAd49 vector transduced between 40 and 51 % of Pro5, Lec2, CHO cells as compared with low transduction efficiency using B16F10 mouse cells. This phenomenon could indicate that, besides CD46, rAd49 can recognize another receptor expressed on hamster cells and not on mouse cells.
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| DISCUSSION |
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In an earlier survey using 100 human serum samples from healthy individuals in Europe, Ad49 demonstrated low seroprevalence with <10 % positive sera (Vogels et al., 2003
). Due to the low seroprevalence observed in this limited screen against Ad49 and since Ad49, being a subgroup D vector, should be immunologically distinct from rAd5 and rAd11 or rAd35, we chose to develop this virus into a vector system.
The genome sequence of Ad49 revealed the general adenoviral genome organization with well-defined early and late gene locations. ORFs proved very similar to other subgroup D members including an extra ORF in the E3 region encoding 49K (Deryckere & Burgert, 1996
). The function of the subgroup D-specific E3/49K protein is not known; however, the sequence predicts it to be a type-I transmembrane protein (Windheim & Burgert, 2002
). Structural proteins important for virus assembly (100K, pIIIa, pVI, pVII and pX) are highly conserved (99100 %) between Ad49 and two other known subgroup D adenoviruses, i.e. Ad9 and Ad46. The similarity of the ORF6 protein derived from the adenoviral E4 region proved to be low between Ad49 and Ad5 (59 %). This possibly helps to explain the observed lack of rAd49 vector propagation on PER.C6 cells due to a poor interaction between the Ad5-derived E1 proteins and the Ad49-derived ORF6 protein. The latter interaction is pivotal, since a complex between the E1B-55K protein and the E4-ORF6 protein (Goodrum et al., 1996
) mediates viral mRNA transport necessary for late viral gene expression and virus replication (Weigel & Dobbelstein, 2000
).
Using replication-incompetent rAd49 vector carrying the luciferase marker gene, we evaluated the worldwide seroprevalence of Ad49 and demonstrated overall low pre-existing immunity and serum titres towards Ad49, including sub-Saharan Africa. At present it is not well understood why on all continents seroprevalence against Ad49 is detected, indicative of global viral spread, whereas antibody titres against Ad49 are generally low. The first Ad49 isolation was reported in 1993 (Schnurr & Dondero, 1993
) and most Ad49 isolations have been reported from AIDS patients, like most human adenoviruses (Crawford-Miksza & Schnurr, 1996
; Hierholzer, 1988
, 1992
; Schnurr & Dondero, 1993
). However, it has been reported that Ad49 infections are not strictly limited to HIV-positive individuals, since Ad49 could also be isolated from clinical samples obtained from apparently healthy individuals, though rarely (Crawford-Miksza & Schnurr, 1996
; De Jong et al., 1999
). These findings, coupled to the observed overall low pre-existing immunity towards Ad49 could indicate that Ad49 has either difficulty in establishing productive infection due to, for instance, impaired transmission, or that Ad49 has developed an immune evasion strategy to escape host immune responses. Although further studies are needed, we attribute the observed low anti-Ad49 pre-existing immunity to impaired transmission, based on observations that human individuals can elicit potent antibody responses against Ad49 and that apparently Ad49 is well controlled in healthy individuals since Ad49 is predominantly isolated from immune compromised individuals. Also, our experiments in mice demonstrate that upon exposure to wt Ad49 these animals elicit high-titred anti-Ad49 antibody levels.
Next, we initiated studies to assess the receptor usage of our rAd49 vector. Studies to date have revealed a striking diversity in receptor usage of human group D adenoviruses (Arnberg et al., 2000a
, b
; Roelvink et al., 1996
, 1998
; Wu et al., 2004
), which prompted us to initiate studies upon rAd49 receptor usage. Our data indicate that rAd49 seems to utilize hCD46, whereas evidence for a role for either sialic acids or CAR could not be established. Analyses of the Ad49 fiber protein sequences revealed that, although our rAd49 does not seem to utilize CAR, the most important CAR-binding residues are present (Bewley et al., 1999
; Kirby et al., 2001
; Roelvink et al., 1999
), a phenomenon previously reported for Ad37. For Ad37, it was shown that this serotype has the ability to bind to the CAR protein but binding did not result in virus entry (Wu et al., 2003
). The authors attributed the inability of cell entry to the short Ad37 fiber shaft, making the fiber too rigid to allow infection (Wu et al., 2003
). This finding supported an earlier study showing that an Ad5 vector carrying the fiber shaft of Ad9 had a reduced CAR-binding and cellular-infection capability (Shayakhmetov & Lieber, 2000
). Like Ad37, our rAd49 vector has a short fiber shaft, consisting of only eight repeats, which might indicate that Ad49 perhaps can bind CAR but cannot enter cells, although further studies are needed to investigate this hypothesis.
Within the rAd49 fiber sequence two of the five possible key residues required for sialic acid binding (Burmeister et al., 2004
), Tyr312 and Lys345, are present, without finding evidence in our studies of productive rAd49 infection through sialic acid binding. This is indicative of an important role for the other three residues (Burmeister et al., 2004
). For subgroup B adenoviruses, as well as for subgroup D member Ad37, it has recently been shown that they can use hCD46 as a cellular receptor (Gaggar et al., 2003
; Segerman et al., 2003
; Sirena et al., 2004
; Wu et al., 2004
) and our studies indicate that Ad49 is also able to use hCD46. Although at present it is unknown whether all hCD46 isoforms (C1, C2, BC1 and BC2) can be utilized by rAd49, our data show that at least the BC1 isoform is used.
We next assessed the potency of an rAd49.SIVGag vaccine in naïve mice, demonstrating that strong SIVGag-specific CD8+ T-lymphocyte responses are elicited, although less high than rAd5-based vaccine. The insert-specific immunity induced by an rAd49 vaccine seemed similar to the anti-SIVGag immune induction obtained with an rAd35 and rAd11 vaccine in naïve mice (Barouch et al., 2004
; Lemckert et al., 2005
). This lower immunogenicity might be explained by the fact that all these vectors use hCD46 as a cellular receptor, which is absent in inbred strains of mice (Verhaagh et al., 2006
), in contrast to the CAR receptor utilized by rAd5. The value of rAd49 as vaccine carrier was subsequently demonstrated in experiments showing that SIVGag responses were not impaired in hosts carrying high anti-Ad5 neutralizing activity, whereas rAd5-mediated SIVGag responses were blunted in such hosts.
Collectively, the data demonstrate that replication-incompetent rAd49 vectors can be efficiently made on established Ad5 E1-complementing cell lines such as PER.C6, resulting in high titre vector batches. Initial studies regarding tropism indicate that the rAd49 vector utilizes hCD46 as receptor and vaccination studies with an rAd49 vector demonstrate that this vaccine carrier induces insert-specific CD8+ T-lymphocyte responses in either the presence or absence of anti-Ad5 immunity. Future prime-boost studies in combination with the previously developed rare human adenoviral vectors will indicate whether an optimal heterologous adenoviral prime-boost regimen can be established in presence of high anti-Ad5 pre-existing immunity.
| ACKNOWLEDGEMENTS |
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Received 29 March 2006;
accepted 24 May 2006.
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