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School of Life Sciences and Biotechnology, Korea University, Anamdong 5-1, Sungbuk, Seoul 136-701, Korea
Correspondence
Byung-Yoon Ahn
ahnbyung{at}korea.ac.kr
| ABSTRACT |
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| INTRODUCTION |
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To search for cellular factors that interact with the HBV core protein, we used the yeast two-hybrid system and identified two Hsp40/DnaJ family proteins, Hdj1 and hTid1, that associate with the carboxyl-terminal region of the core protein. Human Hsp40/DnaJ proteins comprise a large protein family, members of which feature the J domain (named after the bacterial DnaJ protein) and function as co-chaperones in stimulating the ATP-dependent activity of Hsp70 (Ohtsuka & Hata, 2000
). Members of the Hsp40/DnaJ family play diverse roles in many cellular processes, such as folding, translocation, degradation and assembly of multi-protein complexes (Cyr et al., 1994
). Hdj1, the first human Hsp40/DnaJ protein identified, plays important roles in protein translation and folding, as well as in the regulation of Hsp70 function. hTid1, the human homologue of the Drosophila tumour-suppressor protein Tid56, was initially identified by its interaction with the human papillomavirus oncoprotein E7 (Schilling et al., 1998
).
Recent in vitro reconstitution studies showed that the duck hepatitis B virus (DHBV) reverse transcriptase can be activated by adding the purified Hsp40 protein (Beck & Nassal, 2003
; Hu et al., 2002
). Also, Hsp40 acts on the topological reorientation of the HBV large envelope protein (Lambert & Prange, 2003
). Interestingly, hTid1 and other human Hsp40 proteins were identified as the human HCC-associated antigens in a serological analysis of cDNA expression libraries (SEREX) derived from four HCC patients whose tumour-tissue samples were positive for the HBV surface antigen (Wang et al., 2002b
). These results implicate Hsp40 proteins in virus replication and pathogenesis.
Here, we show that the viral core protein interacts with two Hsp40 proteins (Hdj1 and hTid1) and that, in contrast to the enhancement expected from the requirement for Hsp40 in activating viral polymerase protein in vitro, the chaperones reduce virus replication in intact cells.
| METHODS |
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Yeast two-hybrid screening.
For yeast two-hybrid assays, the Matchmaker GAL4 Two-Hybrid system 3 (Clontech) was used. Yeast cells (strain AH109) were transformed sequentially with pGBKT7-coreC and a HeLa cDNA library of 1x106 clones contained in the prey vector pACT2. Plasmids were rescued from colonies grown on SD/Trp/Leu/His/Ade/X-
-Gal plates and were sequenced after their activity was confirmed by retransformation of yeast with pGBKT7-coreC. Identity of the positive clones was searched from databases with the BLAST algorithm developed by the National Center for Biotechnology Information.
Protein expression and immunoblot analysis.
Human hepatoma Huh7 and HepG2 cells were grown in Dulbecco's modified Eagle's medium (DMEM) supplemented with 10 % (v/v) fetal bovine serum, 100 units penicillin ml1 and 100 µg streptomycin ml1. Huh7 cells were transfected with Lipofectamine PLUS (Invitrogen) and HepG2 cells were transfected with FuGene 6 (Roche). Typically, subconfluent cells in six-well plates were transfected with 2 µg expression plasmid, collected 3648 h later and analysed by PAGE and immunoblot assay with the following antibodies: anti-HA (Sigma), anti-V5 (Invitrogen), anti-Tid1 (RS13; Neomarkers), anti-HBcAg (Dako), anti-enhanced green fluorescent protein (EGFP) (Santa Cruz) and anti-p53 (Calbiochem). The intensities of signals were determined with TINA 2.0 software (Raytest). In some experiments, for efficient expression of the recombinant proteins, cells were infected with the vaccinia virus vTF7-3 (Fuerst et al., 1986
) for 1 h before DNA transfection (m.o.i. of 0.5). In other experiments, transfected cells were treated with protease inhibitors, starting from 24 h after transfection. In all transfections, appropriate empty vectors were added to keep the amount of transfected DNA equal.
Immunoprecipitation and pull-down assays.
Huh7 cells grown in 60 mm dishes were co-transfected with 2 µg hTid1LV5/His, hTid1SV5/His or Hdj1V5/His plasmids along with the coreHA or coreCHA constructs. For immunoprecipitation, cells were collected 36 h after transfection and resuspended in 400 µl lysis buffer [10 mM Tris/HCl (pH 7.4), 140 mM NaCl and 0.5 % (v/v) NP-40] and the lysates were clarified by centrifugation at 12 000 g in a microfuge for 10 min at 4 °C. The HBV core protein was precipitated by adding 20 µl protein ASepharose 4 Fast Flow beads (Pharmacia) and 3 µl anti-HBV core antibody to the clarified lysates. After gentle rotation for 2 h at 4 °C, the beads were centrifuged briefly, collected and washed five times with 1 ml buffer [50 mM Tris/HCl (pH 7.4), 0.5 % (v/v) NP-40, 150 mM NaCl and 5 mM EDTA]. The bead-bound proteins were analysed by electrophoresis and immunoblot assay with anti-HA or anti-V5 antibodies.
For the resin pull-down assay, transfected cells were collected and lysed by sonication in 300 µl lysis buffer [20 mM Tris/HCl (pH 8.0), 100 mM NaCl and 1 % (v/v) NP-40]. After lysates were clarified, supernatants were mixed with Talon affinity resin (Clontech) at room temperature for 30 min. Proteins bound to the resin were precipitated by centrifugation at 8000 g in a microfuge for 3 min. After several washes in 20 mM Tris/HCl (pH 8.0) and 100 mM NaCl, the resin-bound proteins were separated by 12 % PAGE and analysed by immunoblot assay.
Sucrose-gradient ultracentrifugation.
Huh7 cells grown in 100 mm dishes were co-transfected with pHBcHA and hTid1SV5/His or Hdj1V5/His plasmids, collected 48 h later and resuspended in 1 ml lysis buffer [10 % (v/v) glycerol, 0.5 % (v/v) NP-40, 1 mM EDTA, 10 µg leupeptin ml1 and 10 µg aprotinin ml1 in PBS]. Lysates were clarified as described in previous sections, layered on top of a 1050 % continuous sucrose gradient in an SW41 Ti rotor (Beckman) and centrifuged at 200 000 g for 2 h at 4 °C. Each fraction was collected through a hole at the bottom of the gradient tube and an 80 µl aliquot was used for electrophoresis and immunoblot assay.
Endogenous polymerase assay (EPA).
The EPA has been described previously by Koschel et al. (2000)
. For purification of HBV core particles, Huh7 cells in 60 mm dishes were transfected with 2 µg pHBV1.3 (either with or without the Hsp40/DnaJ plasmids). Four days later, cells were resuspended in 0.7 ml lysis buffer [50 mM Tris/HCl (pH 7.5), 150 mM NaCl, 5 mM MgCl2 and 0.2 % (v/v) NP-40]. After 15 min incubation on ice, lysates were clarified by centrifugation and mixed for 6 h at 4 °C with 20 µl protein ASepharose CL-4B beads (Pharmacia) that had been pre-incubated with 3 µl anti-HBc antibody. After washing the beads, 50 µl reaction buffer [50 mM Tris/HCl (pH 7.5), 75 mM NH4Cl, 1 mM EDTA, 20 mM MgCl2, 0.1 % (v/v)
-mercaptoethanol, 0.5 % (v/v) NP-40, 0.4 mM dATP, 0.4 mM dGTP, 0.4 mM dTTP and 10 µCi (370 kBq) [
-32P]dCTP (3000 Ci mmol1; Perkin-Elmer)] was added and these mixtures were incubated at 37 °C overnight. To degrade contaminating DNA, 0.25 mg DNase I ml1 was added and mixtures were incubated at 37 °C for 30 min. For disruption of the core particles, 50 µl 1 % (w/v) SDS, 10 mM Tris/HCl (pH 7.5), 10 mM EDTA, 0.6 mg proteinase K ml1 and 0.8 mg yeast tRNA ml1 was added and incubation was continued at 37 °C for 30 min. Viral DNA was extracted and electrophoresed through 1 % agarose gel. Gels were dried in a vacuum and exposed to X-ray film. As a control for the inhibition of HBV replication, cells were treated with 1000 U alpha interferon ml1 (IFN-
; Research Diagnostics), starting 2 h after transfection. To monitor consistency in transfection, pCMV-
(Clontech), containing the gene encoding
-galactosidase under the control of the CMV promoter, was co-transfected. Data were disregarded if the difference in the reporter activity among samples within a set of tests was >5 %.
Small interfering RNA (siRNA)-mediated knock-down of hTid1.
For stable expression of siRNA targeting hTid1, a pair of oligonucleotides was annealed and inserted into the pSilencer2.1-U6 vector according to the manufacturer's protocol (Ambion). The sequences of the oligonucleotides were 5'-GATCCAGCCTATTATCAGCTTGCCTTCAAGAGAGGCAAGCTGATAATAGGCTTTTTTTGGAAA-3' and 5'-AGCTTTTCCAAAAAAAGCCTATTATCAGCTTGCCTCTCTTGAAGGCAAGCTGATAATAGGCTG-3'. Plasmids were transfected into Huh7 cells and selected in DMEM containing 1 µg puromycin ml1 (Sigma). pSilencer, which encodes a hairpin siRNA with sequence of no significant similarity to human, mouse or rat genomes, was used as a control.
Southern blot analysis of viral DNA.
Huh7 cells, stably expressing hTid1-siRNA or negative-control siRNA, were transfected with 2 µg pT-HBV1.2, harvested 4 days later and resuspended in 1 ml lysis buffer [50 mM Tris/HCl (pH 8.0), 100 mM NaCl, 1 % (v/v) NP-40 and 1 mM EDTA]. After 20 min incubation on ice, lysates were clarified by centrifugation at 15 000 g and supernatant was digested with 100 µg DNase I ml1 and 100 µg RNase A ml1 (Promega) at 37 °C for 2 h. Core particles were precipitated with 7 % (w/v) polyethylene glycol and digested with proteinase K at 50 °C for 3 h. Viral DNA was extracted and analysed by Southern blot using a 32P-labelled HBV DNA probe.
Capsid analysis by native agarose-gel electrophoresis.
Cell lysates were prepared as described above. Lysate (20 µl) was mixed with 10x loading buffer and resolved on a 1.2 % agarose gel in TAE buffer. The gel was transferred to nitrocellulose membrane in 20x SSC buffer and analysed by immunoblotting with a polyclonal anti-HBc antibody (Dako; 1 : 5000).
RNA extraction and RT-PCR.
Total RNA was isolated from transfected cells by using TRI Reagent (Molecular Research Center) and treated with DNase I to remove residual DNA. Reverse transcription was performed with gene-specific primers and SuperScript II RNase H-RT (Invitrogen). The resulting cDNA was amplified by PCR.
Other reagents.
N-Carbobenzoxyl-L-leucinyl-L-leucinyl-L-norleucinal (MG132), N-acetyl-L-leucinyl-L-leucinyl-L-norleucinal (ALLN), 1,2-bis(o-aminophenoxy)ethane-N,N,N',N'-tetraacetic acid tetra(acetoxymethyl)ester (BAPTA-AM), trans-epoxysuccinyl-L-leucylamido-4-guanidino butane (E64), leupeptin, pepstatin A and ammonium chloride were purchased from Sigma. Lactacystin-
-lactone (LC-
-lactone) was from Calbiochem.
| RESULTS |
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-Gal plates, whereas coreC conferred no growth. Thus, coreC was used as bait to screen 1x106 cDNA library clones. Among the 11 independent clones with yeast phenotypes that suggested a positive interaction with coreC were the two Hsp40 family proteins Hdj1 (clone 2-20) and hTid1 (clone 5-1) (Fig. 1a
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B (Cheng et al., 2002
To determine whether Hdj1 and hTid1 interact with the viral core protein, we expressed the proteins transiently in cultured human Huh7 hepatoma cells and tested their binding by immunoprecipitation and affinity chromatography. Immunoblot analysis indicated that Hdj1 co-precipitated with the core protein (Fig. 1c
). Similarly, binding of the core protein with the small and large isoforms of hTid1 was confirmed by the resin-binding assay with coreC (Fig. 1d
). Hdj1 was also co-purified with coreC in the same assay (data not shown). These results demonstrated binding of Hsp40/DnaJ proteins with core protein in cultured human hepatoma cells and confirmed the yeast two-hybrid screening result. These results also indicated that the carboxyl-terminal end (aa 447480) of hTid1L is not required for binding core protein, as it is missing in hTid1S (Fig. 1b
).
hTid1 associates with viral capsid-like particles
As the HBV core protein assembles into empty capsid particles, we tested the physical association of Hsp40 proteins with viral capsid particles. Either hTid1S or Hdj1 was co-expressed with the core protein and cell lysates were sedimented in a 1050 % linear sucrose gradient. Immunoblot analysis of the fractions revealed that the majority of the hTid1S precursor co-sedimented with capsid particles, although some precursor was also found in the upper fractions (Fig. 2a
). In the absence of core, hTid1S was detected only in the upper fractions of the gradient (data not shown). These results provided direct evidence for the interaction of the viral capsid-like particles with hTid1. As hTid1S is the major form present in the cell (shown below in Fig. 4a
), we did not investigate the effect of hTid1L. Unlike hTid1, Hdj1 was not associated with the capsid particles and was found in the upper fractions of the gradient (Fig. 2b
). These results suggested that the two Hsp40 proteins differ in their mode of interaction with the core protein. Perhaps hTid1S may associate with residues on the surface of the assembled capsids, whereas Hdj1 may interact with core polypeptide.
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Ectopic expression of Hsp40 inhibits HBV replication
As the finding above raised the possibility that Hsp40/DnaJ proteins may influence virus replication through interaction with the core protein, we tested their effect on HBV replication in cultured cells. Human hepatoma HepG2 cells were transfected with a replication-competent, pHBV1.3 construct together with Hdj1 or hTid1 expression plasmids. Four days later, cytoplasmic viral nucleocapsid particles were isolated by immunoprecipitation and analysed by EPA. In contrast to our expectation that virus replication would be enhanced, expression of either Hsp40 protein resulted in a dose-dependent reduction of the virus replication activity (Fig. 3a
). A comparative assay was performed with cells treated with IFN-
(Fig. 3b
). To determine whether Hsp40 proteins affect capsid formation, viral nucleocapsid was prepared from the cells and separated by native agarose-gel electrophoresis (Fig. 3c
). Consistent with the EPA result, the amount of viral capsid was found to be reduced with co-expression of Hdj1 or hTid1. Thus, despite the apparent difference in association with the capsid particles as shown in the preceding section, both of the Hsp40 proteins showed an inhibitory effect on virus replication to a similar extent.
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Suppression of hTid1 increases HBV replication
To substantiate the negative effect of hTid1 expression on HBV replication observed above, we used RNA-interference technology and generated the hTid1-si cell as described in Methods. Immunoblot analysis showed that the level of both hTid1L and hTid1S isoforms was reduced significantly in this stably transfected cell (Fig. 4a
).
We next examined the effect of hTid1 knock-down on HBV replication. The hTid1-si cell was transfected with pHBV1.2 and the replicated viral DNA was analysed by Southern blotting. A significant increase (83 %) in HBV replication was observed in hTid1-si cells (Fig. 4b
). The result demonstrated that hTid1 has an inhibitory effect on HBV replication. To test which step of virus replication was affected by hTid1, intracellular viral capsid was separated in agarose gel and quantified by immunoblot with anti-core antibody (Fig. 4c
). The level of viral capsid increased accordingly in hTid1-si cells, suggesting that hTid1 inhibits virus replication through limiting the formation of viral nucleocapsids.
Hsp40 proteins destabilize HBx and core proteins
To understand the mechanism by which the Hsp40 proteins reduce virus replication, we tested whether these chaperones alter the level of viral proteins. Some molecular chaperones facilitate protein turnover. In some cases, they simply prevent substrate proteins from forming massive aggregates that are partially shielded from proteolytic attack. In other cases, they function in more specific targeting of substrate proteins to particular proteolytic pathways (Hayes & Dice, 1996
). To determine the effect of Hsp40 proteins on the viral proteins, we co-expressed HBx or core proteins with hTid1 or Hdj1 and analysed the protein levels by immunoblot assay. The levels of core and HBx proteins were reduced significantly by co-expression of Hdj1 (Fig. 5a
), hTid1S (Fig. 5b
) and hTid1L (data not shown), whereas that of EGFP was not affected by the chaperones. This effect was not due to transcriptional control, because expression of each protein was driven by the same promoter element. Also, RT-PCR revealed that core and HBx mRNA levels did not change significantly in the presence of Hsp40 proteins. Thus, these results indicated that Hdj1 and hTid1 promoted the degradation of core and HBx proteins and suggested that the Hsp40 proteins regulate virus replication negatively, probably through destabilization of viral core and HBx proteins.
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, a cellular actin-binding protein unrelated to HBx. The expression level of Np or p53 was not affected by Hsp40 proteins, nor was the expression of HBx affected by actinin-1
(Fig. 5c
Hsp70 stimulates degradation of viral proteins
Hsp40 is known to assist Hsp70 as a co-chaperone and regulate complex formation between Hsp70 and its client proteins (Tsai & Douglas, 1996
; Wall et al., 1995
). Therefore, we tested whether Hsp70 has any additional effect on Hsp40-mediated degradation of HBx and core proteins. HBx or core protein was co-expressed with either Hsp70 or Hsp40, or with both. Again, the HBx level was reduced considerably by Hdj1 or hTid1S, although the additional effect of Hsp70 was barely seen in this experiment due to the nearly complete disappearance of HBx signal by overexpression of each chaperone (Fig. 6a
). However, for core protein, an additive inhibitory effect of Hsp40 and Hsp70 was easily detectable (Fig. 6b
, lanes 4 and 6).
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-lactone and ALLN, no protective effect was seen with the calcium chelator BAPTA-AM, the lysosomal protease inhibitors E64 and leupeptin, lysosomal acidification inhibitor NH4Cl or aspartate protease inhibitor pepstatin A (Fig. 7c, d
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| DISCUSSION |
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In general, molecular chaperones are considered to be beneficial for virus replication (Sullivan & Pipas, 2001
). One recent demonstration in that regard is the role of Hsp40 in the replication of avian adenovirus CELO (Glotzer et al., 2000
). In CELO infection, the Hsp40 and Hsp70 proteins were upregulated, which was attributed to the function of the virus-encoded Gam1 protein. This function was considered essential for the virus, as the Gam1-negative virus was replication-defective. Replication of the Gam1-negative virus, however, could be partially restored by either heat shock or exogenous expression of Hsp40. We initially expected that the Hsp40/DnaJ proteins would assist in viral assembly and thus would probably be advantageous for HBV replication. Instead, our results demonstrate that Hsp40 proteins inhibit HBV replication. Our analysis pointed out that Hdj1 and hTid1 facilitate degradation of core and HBx proteins. Moreover, combined expression of Hsp40 and Hsp70 enhanced the degradation of core and HBx proteins in an additive manner, although Hsp70 alone could induce the degradation to some extent.
Chaperones are involved in various proteolytic pathways, such as chaperone-mediated autophagy and ubiquitin-dependent proteasomal degradation (Hayes & Dice, 1996
). Our data implicate the Hsp40/DnaJ proteins in suppression of oncogenesis through degradation of the viral proteins in this process. Proteasomal degradation is considered important in regulating the intracellular level of HBx, the key regulator of virus replication and oncogenesis (Hu et al., 1999
; Kim et al., 2003
). Human Hsp40/DnaJ proteins, including hTid1, were recently identified as HCC-associated antigens in a SEREX analysis of HBsAg-positive HCC patients (Wang et al., 2002b
). Several studies have implicated hTid1 in the regulation of oncogenic proteins (Cheng et al., 2001
, 2002
; Schaaf et al., 2004
; Schilling et al., 1998
) and suppression of tumour development in animal models (Canamasas et al., 2003
; Lo et al., 2004
). In the latest study, the hTid1 protein was shown to interact with the receptor tyrosine kinase ErbB-2 and promote its degradation, leading to subsequent attenuation of oncogenic signalling in carcinoma cells (Kim et al., 2004
). Whilst our results demonstrate clearly that proteasomal activity is the key process enhanced by Hsp40 proteins for HBx, it is not understood what other proteolytic pathway might be operative for the core protein.
Viral infection poses an enormous threat to host cells. The data presented here suggest that molecular chaperones might perform important antiviral functions for host cells, yet, at the same time, are the targets exploitable by viral-survival strategies. Further study is needed to understand the molecular mechanisms of Hsp40-mediated degradation of viral proteins and the significance of the regulation in virus replication and oncogenesis.
| ACKNOWLEDGEMENTS |
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Received 11 November 2005;
accepted 23 February 2006.
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J. Pogany, J. Stork, Z. Li, and P. D. Nagy In vitro assembly of the Tomato bushy stunt virus replicase requires the host Heat shock protein 70 PNAS, December 16, 2008; 105(50): 19956 - 19961. [Abstract] [Full Text] [PDF] |
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R. Puro and R. J. Schneider Tumor Necrosis Factor Activates a Conserved Innate Antiviral Response to Hepatitis B Virus That Destabilizes Nucleocapsids and Reduces Nuclear Viral DNA J. Virol., July 15, 2007; 81(14): 7351 - 7362. [Abstract] [Full Text] [PDF] |
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