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1 Department of Biological Sciences, University of Warwick, Coventry CV4 7AL, UK
2 French Agency for Food Safety (AFSSA), OIE Reference Laboratory for Turkey Rhinotracheitis, Avian and Rabbit Virology Immunology and Parasitology Unit (VIPAC), BP 53, 22440 Ploufragan, France
Correspondence
Andrew J. Easton
A.J.Easton{at}warwick.ac.uk
| ABSTRACT |
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| INTRODUCTION |
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The metapneumoviruses direct the synthesis of eight mRNA transcripts, encoding nine primary translation products. A reverse-genetics system, which permits rescue of infectious virus from cDNA clones, has been described previously for AMPV (strain LAH A) and used to show that infection with a recombinant virus unable to express both the SH and G genes resulted in the production of unusually large syncytia in Vero cells (Naylor et al., 2004
). A deletion mutant of HMPV lacking the SH and G genes has also been described, but this did not display an altered fusion phenotype in the cells tested (Biacchesi et al., 2004
). These data suggest that virus-directed fusion in AMPV is regulated by either the SH or the G gene and that this differs from HMPV.
The deletion of specific genes by using reverse genetics has been used to explore the function of virus proteins during infection in vitro and in vivo. Several pneumovirus genes have been shown to be dispensable for growth in cell culture, including those encoding the SH, G and M2-2 proteins. However, deletion of these genes has been reported to affect the growth of the viruses in animal models. HMPV lacking both the SH and G genes replicated less well in the upper and lower respiratory tracts of hamsters than wild-type virus. This effect was shown to be due to loss of the G gene, as virus lacking only the SH gene replicated more efficiently in hamster lungs than the wild type, whereas a G gene-deleted virus behaved in a similar way to the double mutant (Biacchesi et al., 2004
). In the hamster model, the viruses lacking the G gene generated a protective response against challenge by wild-type virus (Biacchesi et al., 2004
). Similar results were observed with recombinant HMPV in African green monkeys, where little effect was observed as a result of deleting the SH gene, whereas reductions in virus replication in both the upper and lower respiratory tracts were observed as a result of deletion of the G gene or the M2-2 open reading frame (ORF) (Biacchesi et al., 2005
). However, in contrast to the observations with hamsters, replication efficiency in African green monkeys was more impaired in the lower than the upper respiratory tract, and all of the viruses were immunogenic and protective. Similar experiments have been performed with human respiratory syncytial virus (RSV) in rodents and chimpanzees. Deletion of the RSV G gene resulted in a marked reduction in replication of virus in the lungs of mice (Teng et al., 2001
). Deletion of the RSV SH gene did not impair growth in tissue culture and, in some cell lines, actually improved yields. Deletion of the RSV SH gene resulted in impaired replication in the upper, but not the lower, respiratory tract of mice, and the virus was immunogenic and protective (Bukreyev et al., 1997
). However SH gene-deleted RSV replicated less well in the lower than in the upper respiratory tract in chimpanzees and the symptoms of disease were milder (Whitehead et al., 1999
). The effect of deletion of the RSV M2-2 ORF on virus growth in tissue culture varied from larger plaques and enhanced viral yield to smaller plaques and reduced virus yield. Yields of these deleted viruses in the lungs of infected mice and cotton rats were reduced, but the mice were protected from challenge (Jin et al., 2000
). Replication was also reduced in chimpanzee lungs and the virus was highly immunogenic (Teng et al., 2000
). These data indicate that deletion of the SH gene from pneumoviruses has a less pronounced effect on virus growth in vivo than deletion of the G gene or M2-2 ORFs. However, the effects on virus replication differ between animal models. It is therefore of interest to study the effects of deletion of these genes from AMPV on infection of the natural host. Here, we describe the generation of a series of deletion mutants of AMPV and the characterization of their growth characteristics in tissue culture and in vivo.
| METHODS |
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Infection of turkeys.
Six groups of ten 6-week-old, specific-pathogen-free turkeys (AFSSA-Ploufragan) were housed in separate filtered-air isolation units. Blood samples were taken from all birds for serological testing prior to intranasal inoculation. One group was kept as a non-infected control in a positive-pressure isolation unit, and received only Eagle's minimal essential medium (Eurobio) with HEPES (Sigma-Aldrich) (0.1 ml per bird). The five other groups were housed in negative-pressure isolation units and received the APVA, CASA, dSH, dG or dM2-2 recombinant viruses (under a permit from the French Commission on Genetically Modified Organisms). All viruses were inoculated at a dose of 103.5 TCID50 (0.1 ml) per bird, except for dSH, which was inoculated at 103.2 TCID50 (0.3 ml) per bird. Clinical symptoms were observed and tracheal swabs were prepared individually from all birds on days 3, 6, 10 and 14 post-infection. Final blood samples for serology were collected at 20 days post-inoculation.
Assay of AMPV antibodies.
Antibodies to AMPV were quantified by ELISA, as described previously. An antigen derived from AMPV strain 85051 (Toquin et al., 2000
), belonging to AMPV subgroup A (the same subgroup as the inoculated viruses), was used to improve sensitivity of the ELISA (Toquin et al., 1996
). Antigens derived from AMPV strains 86004 and 85035, belonging to subgroups B and D, respectively (Toquin et al., 2000
; Bäyon-Auboyer et al., 2000
), were run in parallel to check whether the deletion of the highly subgroup-specific SH or G genes from the inoculated recombinant viruses resulted in an altered inter-subgroup cross-reactivity of the antibodies elicited by these genetically modified viruses.
Quantitative PCR of AMPV N gene.
A specific, N gene-based Taqman real-time RT-PCR (RRT-PCR) was developed and validated for quantitative use according to a previously reported methodology (Guionie et al., 2007
). Briefly, suitable primers and a Taqman FAM-labelled probe were defined from the sequence of the N gene of AMPV strain CVL14.1 by using Primer Express version 2.0 software (Applied Biosystems). The Taqman RRT-PCR assay was run in a 96-well format, using the ABI Prism 7000 sequence detection system (Applied Biosystems) and a QuantiTect probe RT-PCR kit (Qiagen). Reaction mixes and thermocycling parameters were as described previously (Guionie et al., 2007
), except that 40 cycles were used. Data were analysed with the Sequence Detection version 1.2.3 software (Applied Biosystems). The baseline and threshold values were determined automatically (Auto-Ct option). Quantitative results were calculated automatically by including a reference panel of serial dilutions of a known amount of an RNA transcript produced by in vitro transcription of an N gene-containing plasmid (Guionie et al., 2007
) in each RRT-PCR experiment.
| RESULTS |
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In order to investigate the potential for the SH genes from viruses in other AMPV subgroups to complement that from subgroup A, two further recombinant viruses were generated. In one, the SH gene of the subgroup A virus was replaced with that from a subgroup B virus. Recombinant virus isolated from this clone gave predominantly non-syncytial plaques (Table 1
; Fig. 3
). In contrast, a recombinant virus in which the subgroup A virus SH gene was replaced with that of a subgroup C virus almost exclusively generated syncytial plaques (Table 1
; Fig. 3
). The different abilities of the SH genes from different AMPV subgroups to complement the plaque morphology reflect the genetic distances between these viruses.
Prolonged serial passage of AMPV in mammalian cell culture results in loss of virulence in vivo. However, despite the loss of virulence, cell-culture-grown virus is able to infect turkeys, and virus can be detected in the trachea, together with an associated antibody response. We used an ELISA to detect antibodies and quantitative RT-PCR to detect virus genome and mRNA in turkeys infected with the recombinant viruses. The results showed that, despite the poorer growth in cell culture, CASA virus elicits an antibody response almost as high as that seen for the recombinant virus APVA and is released at a similar level in the trachea (Table 2
). With both CASA and APVA, all birds were positive both for antibody and, at day 6 post-infection, for virus in the trachea. Fewer birds infected with viruses deleted for the SH, G or M2-2 genes showed the presence of anti-AMPV antibody or virus secretion and, in the positive birds, the levels of antibody and shed virus were lower than in controls infected with non-deleted viruses. The most dramatic difference was seen with the dSH virus, where infection resulted in only half of the birds being antibody-positive, with the titres being approximately one-third of that of the relevant wild-type virus (CASA); no virus RNA was detectable in any bird (Table 2
). In the case of the G and M2-2 gene-deleted viruses, some birds gave positive results in each assay; however, there was no correlation between the birds containing antibody and those showing the presence of virus RNA, e.g. with the G-gene-deleted virus, one turkey remained seronegative throughout the experiment, but secreted virus at 6 days post-infection, whilst no virus RNA was detected in one bird that was seropositive at 20 days post-inoculation. Similarly, for the M2-2-deleted virus, virus RNA was detected in two seronegative turkeys at 6 and 14 days post-infection, but could not be detected in two seropositive turkeys.
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| DISCUSSION |
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A recombinant AMPV lacking the G gene showed no growth reduction in cell culture (Fig. 2
), similar to reports for G gene-deleted HMPV, the other metapneumovirus (Biacchesi et al., 2004
). This contrasts with data on deletion of the RSV G gene, which results in a significant reduction in virus yield (Techaarpornkul et al., 2001
), suggesting that the metapneumoviruses are less dependent upon the presence of G protein for replication in cell culture than the pneumoviruses. However, in RSV, deletion of the G gene was shown to have a differential effect in different cell lines (Teng et al., 2001
). Viruses lacking the G gene or M2-2 ORF both showed reduced frequency and yield of replication in turkeys, as measured by virus released into the trachea, and also elicited a reduced frequency of serum antibody response compared with the wild-type virus. This is comparable with the situation with HMPV, where replication in cell culture was not impaired by deletion of the SH or G genes. However, loss of the G gene resulted in reduced replication in hamsters and African green monkeys (Biacchesi et al., 2004
, 2005
).
In contrast to the situation in other pneumoviruses AMPV lacking the SH gene replicated significantly less well than the wild-type virus control and the other deleted viruses, both in cell culture and in turkeys. In all cases, the deleted AMPVs either failed (dSH virus) or were significantly impaired (dG and dM2-2 viruses) in producing virus in the trachea of infected birds (Table 2
). The lack of production of virus RNA was mirrored by the poor immunogenicity of the viruses, with serum antibody generated in only approximately half of the infected animals. In the cases of the G- and M2-2-deleted viruses, where an infection was established, antibody levels were similar to those seen with wild-type virus. The presence of the antibody indicates that the viruses did indeed replicate to some extent in the birds. Whilst ELISA-positive, virus RNA-negative birds may reflect a situation where poorly replicating viruses are cleared, consideration of individual birds identified animals that were virus RNA-positive and ELISA-negative (data not shown). The most extreme examples of the lack of correlation between ELISA and PCR results were seen with birds infected with SH-deleted virus, where no virus genomic RNA was detected at any time, although some birds showed detectable serum antibody. The lack of correlation between a positive virus RNA result and a negative ELISA result could be related to the type of antibody measured in the assay, as ELISA titres have recently been shown not to correlate with the levels of virus-neutralizing antibody in AMPV-infected birds (Liman & Rautenschlein, 2007
). However, ELISA has been shown to be more sensitive than virus neutralization (Eterradossi et al., 1995
). It is possible that the discrepancies are due to virus replication in tissues other than the trachea, as suggested by Cook et al. (1999)
.
The subgroup specificity of the ELISA antibody responses elicited by recombinant subgroup A viruses, such as APVA and CASA, was consistent with that reported previously for wild-type subgroup A viruses, which are detected most efficiently with ELISA antigens belonging to the homologous AMPV subgroup (Eterradossi et al., 1995
; Toquin et al., 2000
). Most interestingly, whilst the SH and G genes are both highly subgroup-specific, sera from animals infected with subgroup A viruses lacking either the SH and G genes did not differ in the cross-reactivity with subgroup B and subgroup D antigens in an ELISA compared with sera from animals infected with a wild-type virus. Indeed, the sera raised in response to infection with the dSH and dG viruses were detected by the subgroup A ELISA antigen more efficiently, suggesting a higher level of subgroup specificity. This suggests that neither the SH nor the G protein alone is the molecular basis for the antigenic subgroup specificity in subgroup A AMPV.
The data presented here show clearly that the AMPV subgroup A or B SH protein regulates the cell–cell fusion process when present in a subgroup A genetic background. Whilst this is, in principle, similar to the situation with RSV, where the SH protein has been implicated in fusion, there are significant differences. In particular, for AMPV, the absence rather than the presence of the SH protein enhances fusion. It is not known whether the large syncytia in the SH-gene-deleted virus are due to the presence of the SH protein having an inhibitory effect on fusion or whether the SH protein is required for development of the focal type of cytopathic effect, and this will require further investigation. The effects of deletion of the SH gene on the processing and localization of the F protein are also unknown and could provide a means for the SH protein to influence the cell-fusion process. The failure of the SH protein from subgroup C to complement the missing subgroup A protein is likely to reflect the greater phylogenetic distance between subgroups C and A compared with that between subgroups B and A. This could result from a failure of subgroup C SH protein to interact with a subgroup A virus component or from the SH protein not being involved in regulation of fusion in subgroup C viruses, as appears to be the case for HMPV, to which subgroup C AMPV isolates are related most closely. The phenotypes of the various viruses are not due to alterations in the relative expression of the G gene, as we have shown that the relative expression of the G gene in dSH is not affected compared with wild-type virus. Similarly, the introduction of sequences into the intergenic regions in CASA results in only a very slight increase in the relative expression of the G gene (R. Ling & A. J. Easton, unpublished data).
The results described here indicate that, despite the reduced replication of a recombinant AMPV modified to facilitate genetic modification in cell culture, replication in birds and antibody response were relatively unaffected. Unfortunately, a consistent observation with AMPV is that extensive passage in tissue culture renders the virus non-pathogenic, so it is not possible to investigate aspects of disease with recombinant viruses. However, a reverse-genetics approach is valuable for studying protective responses or generating vaccine candidates. In contrast to previous reports with recombinant pneumovirus infections, it has been possible to study this virus in its natural host and the data reported here indicate that, unexpectedly, the SH gene plays an important role in AMPV replication in tissue culture and in vivo. The data also show that even levels of recombinant virus replication that cannot be detected in the trachea can induce an antibody response. By using this system, it will be possible to explore further the role(s) of virus proteins in the natural host.
| ACKNOWLEDGEMENTS |
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Received 10 July 2007;
accepted 1 October 2007.
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