Analysis of the entire genomes of torque teno midi virus variants in chimpanzees: infrequent cross-species infection between humans and chimpanzees, by M. Ninomiya, M. Takahashi, Y. Hoshino, K. Ichiyama, P. Simmonds and H. Okamoto
Journal of General Virology vol. 90, part 2, pp. 347 - 358
Supplementary Table S1. Positions and nucleotide sequences of oligonucleotide primers used for amplification of entire or partial chimpanzee TTMDV genomes. [PDF] (43 kb)
Supplementary Fig. S1. Phylogenetic trees constructed by using the neighbour-joining method, based on the partial nucleotide sequences of TTV, TTMDV and TTMV isolates obtained from chimpanzee 108 and 206, using a macaque TTV-like variant (Mf-TTV3) as an outgroup.
Supplementary Fig. S2. Phylogenetic tree constructed based on the 83 nt sequence of 21 isolates obtained by chimpanzee TTMDV-specific PCR as well as those of three chimpanzee TTMDV isolates and 22 human SAV/TTMDV isolates.
[PDF of both figures] (195 kb)
