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Genomic characterization of the first insectivoran papillomavirus reveals an unusually long, second non-coding region and indicates a close relationship to Betapapillomavirus, by Eric Schulz, Marc Gottschling, Ignacio G. Bravo, Ullrich Wittstatt, Eggert Stockfleth and Ingo Nindl

Journal of General Virology vol. 90, part 3, pp. 626–633

Supplementary Table S1. List of papillomavirus sequences used in this study, including further information and characteristics

Supplementary Table S2. Predicted transcription factor binding sites and other non-coding elements in the EHPV genome

Supplementary Table S3. Predicted structural and functional elements of the EHPV proteins

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Supplementary Fig. S1. Maximum-likelihood (ML) tree of papillomaviruses (PV) comprising a representative set of 20 human and 47 non-human types and putatively novel types, as inferred from an E1 amino acid (aa) sequence analysis (613 parsimony-informative aa positions).

Supplementary Fig. S2. ML tree of PV comprising a representative set of 20 human and 47 non-human types and putatively novel types, as inferred from an E2 amino acid sequence analysis (262 parsimony-informative aa positions).

Supplementary Fig. S3. ML tree of PV comprising a representative set of 20 human and 47 non-human types and putatively novel types, as inferred from a L2 amino acid sequence analysis (586 parsimony-informative aa positions).

Supplementary Fig. S4. ML tree of PV comprising a representative set of 20 human and 47 non-human types and putatively novel types, as inferred from a L1 amino acid sequence analysis (441 parsimony-informative aa positions).

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Supplementary Data. Sequence similarity matrix

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