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1 Université Lille Nord de France, F-59000 Lille, France
2 CNRS, Institut de Biologie de Lille (UMR8161), F-59021 Lille, France
3 Institut Pasteur de Lille, F-59019 Lille, France
Correspondence
Jean Dubuisson
jean.dubuisson{at}ibl.fr
| ABSTRACT |
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-helices that contain ER-retention signals. To understand further the ER retention of the prME heterodimer, we characterized the subcellular localization of chimeric proteins made of a reporter protein fused to the transmembrane segments of YFV envelope proteins. We showed that at least three of the transmembrane segments of the prME heterodimer are ER-retention signals. Interestingly, increasing the length of these
-helices led to the export of the chimeric proteins out of the ER. Furthermore, adding a diacidic export signal at the C terminus of the first transmembrane segment of the E protein also induced export to the cell surface. However, adding this export signal at the C terminus of the first transmembrane segment of E in the context of prME did not change the subcellular localization of the prME heterodimer, suggesting the presence of a stronger ER-retention signal outside the first transmembrane segment of E. Importantly, the diacidic export motif added to the C terminus of the first transmembrane segment of the prM protein was not sufficient to export a chimeric protein out of the ER, indicating that this sequence is a dominant ER-retention signal. Together, these data indicate that a combination of several signals of different strengths contributes to the ER retention of the YFV envelope protein heterodimer.
These authors contributed equally to this work. ![]()
| INTRODUCTION |
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-helices (Zhang et al., 2003a| RESULTS |
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Although an ER-retention signal is present in TM1 of E, the transmembrane segments of YFV envelope proteins do not contain an export signal. Indeed, the envelope proteins of YFV do not have a cytosolic tail (Zhang et al., 2003a
). To test whether the lack of such an export signal can contribute to the ER retention of YFV envelope proteins, we added an export motif at the C terminus of the chimeric CD4–TM1E protein. This was obtained by fusing the vesicular stomatitis virus glycoprotein (VSV-G) cytosolic tail at the C terminus of CD4–TM1E (Fig. 1b
; CD4–TM1E–G), which contains a DIE motif corresponding to an export signal (Nishimura & Balch, 1997
). The presence of this motif led to an export of the chimeric protein at the plasma membrane (Fig. 1c
). Indeed, as for wild-type CD4, the immunofluorescent signal was detected predominantly at the plasma membrane when the VSV-G cytosolic tail was added at the C terminus of CD4–TM1E (CD4–TM1E–G), whereas the CD4–TM1E molecule was retained in the ER. Furthermore, mutation of the export motif within the VSV-G tail led to an intracellular localization of the chimera (CD4–TM1E–Gmut) very similar to that of CD4–TM1E. The export of CD4–TM1E–G was confirmed by analysing cell surface-biotinylated proteins. In contrast to CD4–TM1E or CD4–TM1E–Gmut, a large fraction of CD4–TM1E–G was detected at the plasma membrane, similar to what was observed for wild-type CD4 (Fig. 1d
). A quantitative analysis indicated that CD4–TM1E–G was exported to the plasma membrane at the same level as the control CD4 protein, whereas only 5 % of CD4–TM1E or TM1E–Gmut was exported to the cell surface. Together, these data indicate that the lack of an export signal contributes to the ER retention of CD4–TM1E.
Tagging the prME heterodimer with a diacidic export motif does not relieve ER retention
As adding an export signal at the C terminus of CD4–TM1E led to export out of the ER, we wondered whether such a signal would also be able to induce the export of the prME heterodimer out of the ER. We therefore fused a VSV-G cytosolic tail at the C terminus of prME. Deletion of the second transmembrane segment of the E protein (TM2) was necessary to position the export motif of VSV-G into the cytosol. Such a deletion does not affect the functions of the prME heterodimer. Indeed, a similar deletion in the prME heterodimer of tick-borne encephalitis virus, another flavivirus, has been shown to maintain the functions of the envelope proteins (Allison et al., 1999
). As shown in Fig. 2
, adding an export motif at the C terminus of the prME heterodimer did not affect its subcellular localization. Indeed, immunofluorescence detection of the tagged E protein with an anti-E antibody (2D12
[PDB]
) or an antibody recognizing the VSV-G cytosolic tail (P5D4) showed an intracellular accumulation of the prME–G protein, similar to what was observed for wild-type prME. In contrast, CD4–TM1E–G, which was used as a control for export out of the ER, showed accumulation of the fluorescent signal at the plasma membrane and the Golgi apparatus. These data indicate that, in the context of prME, the DIE export motif is not strong enough to compete with the ER retention of the prME heterodimer.
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As insertion of an ALALAL sequence in the middle of TM1 of prM alters the ER retention of this transmembrane segment, we tested whether a combination of this ALALAL insertion in TM1 of prM together with the addition of VSV-G export signal at the C terminus of TM1 of E would lead to export of prME. However, to avoid any interference with potential additional ER-retention signal(s) in the ectodomains of these proteins, this was tested in CD4–TMprM(AL)3–TM1E–G chimeric protein (Fig. 3
). As shown in Fig. 3(b)
, CD4–TMprM(AL)3–TM1E–G was retained in the ER, despite the presence of the ALALAL insertion in TM1 of prM and an export signal at the C terminus of TM1 of E, suggesting that an additional ER-retention signal might be present in the second transmembrane passage of prM.
Identification of an ER-retention signal in TM2 of prM
Although an ER-retention signal is present in the first transmembrane segment of prM, the transmembrane region of prM is composed of two antiparallel transmembrane
-helices and we cannot exclude an additional role for the second transmembrane segment (TM2) in ER retention, as suggested above. To test this hypothesis, TM2 of prM was fused to the reporter green fluorescent protein (GFP) instead of CD4 (Fig. 5a
; TM2prM–GFP). Indeed, due to the opposite orientation of this segment compared with TM1, a fusion with the ectodomain of CD4 was not possible in this case. As shown in Fig. 5(b)
, this chimeric protein was retained in an intracellular compartment. Furthermore, co-immunostaining with ER (calnexin) and Golgi (GM130) markers indicated that TM2prM–GFP is retained in the ER (Fig. 5b
). As for ER retention mediated by TM1 of prM and E, we tested whether adding two helix turns in TM2 of prM would lead to a different subcellular localization of the TM2prM–GFP reporter construct. We therefore added an ALALAL sequence in the middle of TM2 of prM and compared the subcellular localization of this protein (TM2prM(AL)3–GFP) with that of TM2prM–GFP. Although TM2prM(AL)3–GFP was not expressed at the plasma membrane, its intracellular distribution was different from that of TM2prM–GFP (Fig. 5b
). Indeed, the immunofluorescent material was concentrated predominantly in the perinuclear region. To evaluate further the subcellular localization of TM2prM(AL)3–GFP, co-immunostainings were performed with ER (calnexin) and Golgi (GM130) markers. As shown in Fig. 5(b)
, a strong colocalization with GM130 was observed, indicating that a large proportion of TM2prM(AL)3–GFP is localized in the Golgi. Together, these data indicate that TM2 of prM also contains an ER-retention function.
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| DISCUSSION |
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The addition of a diacidic export motif can outweigh the effect of the ER-retention signal of TM1 of E. As for some other proteins (Pedrazzini et al., 1996
; Szczesna-Skorupa & Kemper, 2000
; Yang et al., 1997
), signals for ER retention are present in the transmembrane domains of YFV envelope proteins. Importantly, export out of the ER can also be modulated by the presence or absence of specific export motifs, such as the well-characterized diacidic motif (Nishimura & Balch, 1997
). Interestingly, adding such a diacidic export motif at the C terminus of TM1 of E led to export to the cell surface, indicating that the diacidic motif is dominant over the ER-retention signal present in TM1 of E. ER localization of a protein can potentially be due either to retrieval by retrograde transport carriers or to exclusion from anterograde transport carriers. However, it has recently been shown that proteins with a short transmembrane domain are excluded from ER exit sites, indicating that physicochemical features of the transmembrane domain influence sorting of membrane proteins by simple receptor-independent mechanisms based on partitioning (Ronchi et al., 2008
). A transmembrane protein could thus seek ER subcompartments in which the lipid composition better matches its length/hydrophobicity. Although detailed information is lacking so far, lipid compositional differences between ER exit sites, transport carriers and the bulk of the ER are very likely to exist. In this context, our data with TM1 of E suggest that the presence of an export motif might force the reporter protein to be redirected to the ER exit sites to be actively incorporated into transport carriers. ER localization of CD4–TM1E can therefore be seen as passive retention in an ER subcompartment due to suboptimal physicochemical properties of the transmembrane domain. Interestingly, increasing the length can modify the properties of the TM domains, which probably allows the protein to diffuse into different subcompartments of the ER and be passively incorporated into transport carriers.
The addition of a diacidic export motif cannot outweigh the effect of the ER-retention signal of TM1 of prM. This indicates that the ER-retention signal present in TM1 of prM is dominant over the diacidic motif. These data also suggest that, in this context, the presence of an export motif cannot force the reporter protein to be redirected to the ER exit sites to be actively incorporated into transport carriers. Differences in the amino acid composition between TM1 of prM and TM1 of E may potentially explain their difference in competing with the diacidic export motif. Furthermore, we cannot exclude the possibility that TM1 of prM is retained in the ER by a receptor interacting with this transmembrane region. If it is the case, the insertion of the ALALAL sequence would alter the motif involved in the interaction with the ER receptor.
YFV envelope proteins are multi-spanning membrane proteins. Indeed, the C termini of prM and E form two antiparallel transmembrane
-helices (Zhang et al., 2003a
, b
). This unusual topology for viral envelope proteins is due to the fact that YFV proteins are synthesized as a polyprotein, which is cleaved co-translationally by a cellular signal peptidase between prM and E and between E and the downstream protein NS1 (reviewed by Lindenbach et al., 2007
). In this context, the second transmembrane segment of prM and E acts as a signal for reinitiation of translocation (signal-like sequence) of the downstream proteins. By being retained as transmembrane sequences, the signals of reinitiation of translocation present at the C termini (TM2) of prM and E can also play additional functions. Here, we show that TM2 of prM also contributes to the ER retention of prM.
Interestingly, the envelope glycoproteins of hepatitis C virus (HCV), another member of the family Flaviviridae, also contain ER-retention motifs in their transmembrane domains (Cocquerel et al., 2002
). However, for HCV, the retention mechanism involves charged residues of the transmembrane domains, in contrast to YFV envelope protein, for which the mechanism of ER retention appears to rely primarily on the length of the transmembrane segments and not on the presence of charged residues. It is striking that both viruses use the transmembrane domains as retention motifs for their envelope proteins, but that they use different cellular mechanisms for this function. This highlights the peculiar importance of the transmembrane domains of the envelope proteins for the biology of the viruses of this family.
As a result of good conservation in the organization of the transmembrane domains in prM and E of members of the genus Flavivirus (Cocquerel et al., 2000
), ER-retention signals, similar to those characterized in this work, are likely to be present in the other flaviviruses. However, differences in the strength of such signals can exist, as highlighted recently (Hsieh et al., 2008
). The flavivirus envelope protein heterodimer prME plays a major role in the budding process leading to the formation of the virus particle (reviewed by Heinz & Allison, 2000
). After budding in the ER, the virus particles are transported through the normal secretory pathway (Lorenz et al., 2003
; Mackenzie & Westaway, 2001
). The presence of several ER-retention signals is important for the ER localization of prME, a major player of the budding process. Furthermore, the presence of a dominant ER-localization signal in prM might also direct the prME heterodimer to a subcompartment of the ER in which budding takes place. In conclusion, the transmembrane domains of the flavivirus envelope proteins are multifunctional. Their structure and topology are important for the processing of the viral polyprotein and for the budding process (Op De Beeck et al., 2003
). In addition, we show here that they contain ER-localization signals that are likely to be essential for the budding process to take place in the appropriate compartment.
| METHODS |
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Antibodies.
mAbs 2D12 (anti-E; ATCC CRL-1689) and OKT4 (anti-CD4; ATCC CRL-8002) were from ATCC. mAb P5D4, directed against VSV-G, was from Sigma, the polyclonal anti-CD4 was from Santa Cruz and the anti-PDI, anti-calnexin and anti-calreticulin antibodies were from Stressgen. Mouse anti-GM130 mAb was purchased from BD Biosciences. Alexa 488- and Alexa 546-conjugated goat anti-rabbit and anti-mouse IgG were from Molecular Probes. Cy3-conjugated goat anti-rat IgG was from Jackson ImmunoResearch.
Plasmids.
Plasmids expressing chimeric proteins were constructed by using standard methodology (Sambrook et al., 1989
) in the context of a pcDNA3.1+ vector (Invitrogen). YFV sequences were amplified from plasmid pAP5, which contains the sequence encoding the structural proteins of the YFV 17D-204-Pasteur strain (Despres et al., 1987
). Mutants were constructed by sequential PCR steps as described by Ausubel et al. (2000)
using the high-fidelity Deep Vent DNA polymerase (New England Biolabs). The mutants were then assembled by a second PCR amplification and verified by sequencing (Ausubel et al., 2000). For some constructs, a VSV-G cytosolic tail (VGIHLCIKLKHTKKRQIYTDIEMNRLGK) containing the DIE export motif was fused at the C terminus of chimeric proteins. In some of these constructs, the export signal of the VSV-G cytosolic tail was mutated by replacing all the amino acids of the YTDIEM sequence by Ala residues (Sevier et al., 2000
). The sequence encoding the TM2 of prM was generated by PCR and cloned into the pEGFP-N1 plasmid (Clontech) to express TM2 of prM in fusion with GFP. As TM2 functions as a signal peptide, we abolished the cleavage between TM2 and GFP by replacing the C-terminal amino acid of TM2 by an Arg residue, which is known to abolish signal peptidase processing. The CD4–TMprM–TM1E–G construct was made to produce a fusion protein devoid of prME ectodomains and containing the ectodomain of CD4 and a VSV-G cytosolic tail. For this construct, the C-terminal amino acid of TM2 of prM was replaced by an Arg residue to avoid cleavage between the TM2 of prM and the TM1 of E. Furthermore, an influenza haemagglutinin (HA) epitope (YPYDVPDYA) surrounded by two glycine residues was inserted between the transmembrane domain of prM and the first transmembrane domain of E. All of the CD4 constructs contained the CD4 signal peptide and prME contained the prM signal sequence.
Indirect immunofluorescence microscopy.
HeLa cells were grown on 12 mm glass coverslips and transfected with the appropriate plasmid using FuGENE 6 (Roche). At the indicated time, cells were fixed with 3 % paraformaldehyde and then permeabilized with 0.1 % Triton X-100 (Sigma-Aldrich) in PBS. Immunolabelling and confocal microscopy were performed as described previously (Rouillé et al., 2006
).
Detection of cell-surface biotinylated proteins.
Cell-surface biotinylation was performed as described previously (Belouzard et al., 2004
).
| ACKNOWLEDGEMENTS |
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| REFERENCES |
|---|
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|
|---|
Allison, S. L., Stiasny, K., Stadler, K., Mandl, C. W. & Heinz, F. X. (1999). Mapping of functional elements in the stem-anchor region of tick-borne encephalitis virus envelope protein E. J Virol 73, 5605–5612.
Ausubel, F. M., Brent, R., Kingston, R. E., Moore, A. D., Seidman, J. G., Smith, J. A. & Struhl, K. (editors) (2000). Current Protocols in Molecular Biology. New York: Wiley.
Belouzard, S., Delcroix, D. & Rouille, Y. (2004). Low levels of expression of leptin receptor at the cell surface result from constitutive endocytosis and intracellular retention in the biosynthetic pathway. J Biol Chem 279, 28499–28508.
Bretscher, M. S. & Munro, S. (1993). Cholesterol and Golgi apparatus. Science 261, 1280–1281.
Cocquerel, L., Wychowski, C., Minner, F., Penin, F. & Dubuisson, J. (2000). Charged residues in the transmembrane domains of hepatitis C virus glycoproteins play a key role in the processing, subcellular localization and assembly of these envelope proteins. J Virol 74, 3623–3633.
Cocquerel, L., Op de Beeck, A., Lambot, M., Roussel, J., Delgrange, D., Pillez, A., Wychowski, C., Penin, F. & Dubuisson, J. (2002). Topologic changes in the transmembrane domains of hepatitis C virus envelope glycoproteins. EMBO J 21, 2893–2902.[CrossRef][Medline]
Cole, N. B., Sciaky, N., Marotta, A., Song, J. & Lippincott-Schwartz, J. (1996). Golgi dispersal during microtubule disruption: regeneration of Golgi stacks at peripheral endoplasmic reticulum exit sites. Mol Biol Cell 7, 631–650.[Abstract]
Despres, P., Cahour, A., Dupuy, A., Deubel, V., Bouloy, M., Digoutte, J. P. & Girard, M. (1987). High genetic stability of the region coding for the structural proteins of yellow fever virus strain 17D. J Gen Virol 68, 2245–2247.
Heinz, F. X. & Allison, S. L. (2000). Structures and mechanisms in flavivirus fusion. Adv Virus Res 55, 231–269.[CrossRef][Medline]
Hsieh, S. C., Liu, I. J., King, C. C., Chang, G. J. & Wang, W. K. (2008). A strong endoplasmic reticulum retention signal in the stem-anchor region of envelope glycoprotein of dengue virus type 2 affects the production of virus-like particles. Virology 374, 338–350.[CrossRef][Medline]
Konishi, E. & Mason, P. W. (1993). Proper maturation of the Japanese encephalitis virus envelope glycoprotein requires cosynthesis with the premembrane protein. J Virol 67, 1672–1675.
Kuhn, R. J., Zhang, W., Rossmann, M. G., Pletnev, S. V., Corver, J., Lenches, E., Jones, C. T., Mukhopadhyay, S., Chipman, P. R. & other authors (2002). Structure of dengue virus: implications for flavivirus organization, maturation, and fusion. Cell 108, 717–725.[CrossRef][Medline]
Lemmon, M. A., MacKenzie, K. R., Arkin, I. T. & Engelman, D. M. (1997). Transmembrane
-helix interactions in folding and oligomerization of integral membrane proteins. In Membrane Protein Assembly, pp. 3–23. Edited by G. von Heijne. Heidelberg: Springer.
Lewis, M. J. & Pelham, H. R. B. (1992). Ligand-induced redistribution of a human KDEL receptor from the Golgi complex to the endoplasmic reticulum. Cell 68, 353–364.[CrossRef][Medline]
Lindenbach, B. D., Thiel, H. J. & Rice, C. M. (2007). Flaviviridae: the viruses and their replication. In Fields Virology, 5th edn, pp. 1101–1152. Edited by D. M. Knipe & P. M. Howley. Philadelphia, PA: Lippincott Williams & Wilkins.
Lorenz, I. C., Kartenbeck, J., Mezzacasa, A., Allison, S. L., Heinz, F. X. & Helenius, A. (2003). Intracellular assembly and secretion of recombinant subviral particles from tick-borne encephalitis virus. J Virol 77, 4370–4382.
Mackenzie, J. M. & Westaway, E. G. (2001). Assembly and maturation of the flavivirus Kunjin virus appear to occur in the rough endoplasmic reticulum and along the secretory pathway, respectively. J Virol 75, 10787–10799.
Martire, G., Mottola, G., Pascale, M. C., Malagolini, N., Turrini, I., Serafini-Cessi, F., Jackson, M. R. & Bonatti, S. (1996). Different fate of a single reporter protein containing KDEL or KKXX targeting signals stably expressed in mammalian cells. J Biol Chem 271, 3541–3547.
Nishimura, N. & Balch, W. E. (1997). A di-acidic signal required for selective export from the endoplasmic reticulum. Science 277, 556–558.
Op De Beeck, A., Molenkamp, R., Caron, M., Ben Younes, A., Bredenbeek, P. & Dubuisson, J. (2003). Role of the transmembrane domains of prM and E proteins in the formation of yellow fever virus envelope. J Virol 77, 813–820.
Op De Beeck, A., Rouillé, Y., Caron, M., Duvet, S. & Dubuisson, J. (2004). The transmembrane domains of prM and E proteins of yellow fever virus are ER localization signals. J Virol 78, 12591–12602.
Pedrazzini, E., Villa, A. & Borgese, N. (1996). A mutant cytochrome b5 with a lengthened membrane anchor escapes from the endoplasmic reticulum and reaches the plasma membrane. Proc Natl Acad Sci U S A 93, 4207–4212.
Ronchi, P., Colombo, S., Francolini, M. & Borgese, N. (2008). Transmembrane domain-dependent partitioning of membrane proteins within the endoplasmic reticulum. J Cell Biol 181, 105–118.
Rouillé, Y., Helle, F., Delgrange, D., Roingeard, P., Voisset, C., Blanchard, E., Belouzard, S., McKeating, J., Patel, A. H. & other authors (2006). Subcellular localization of hepatitis C virus structural proteins in a cell culture system that efficiently replicates the virus. J Virol 80, 2832–2841.
Sambrook, J., Fritsch, E. F. & Maniatis, T. (1989). Molecular Cloning: a Laboratory Manual, 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory.
Saraste, J. & Svensson, K. (1991). Distribution of the intermediate elements operating in ER to Golgi transport. J Cell Sci 100, 415–430.
Schweizer, A., Fransen, J. A. M., Bächi, T., Ginsel, L. & Hauri, H.-P. (1988). Identification, by a monoclonal antibody, of a 53-kD protein associated with tubulo-vesicular compartment at the cis-side of the Golgi apparatus. J Cell Biol 107, 1643–1653.
Sevier, C. S., Weisz, O. A., Davis, M. & Machamer, C. E. (2000). Efficient export of the vesicular stomatitis virus G protein from the endoplasmic reticulum requires a signal in the cytoplasmic tail that includes both tyrosine-based and di-acidic motifs. Mol Biol Cell 11, 13–22.
Shenkman, M., Ayalon, M. & Lederkremer, G. Z. (1997). Endoplasmic reticulum quality control of asialoglycoprotein receptor H2a involves determinant for retention and not retrieval. Proc Natl Acad Sci U S A 94, 11363–11368.
Szczesna-Skorupa, E. & Kemper, B. (2000). Endoplasmic reticulum retention determinants in the transmembrane and linker domains of cytochrome P450 2C1. J Biol Chem 275, 19409–19415.
Townsley, F. M., Wilson, D. W. & Pelham, H. R. B. (1993). Mutational analysis of the human KDEL receptor: distinct structural requirements for Golgi retention, ligand binding and retrograde transport. EMBO J 12, 2821–2829.[Medline]
Wengler, G. (1989). Cell-associated West Nile flavivirus is covered with E+pre-M protein heterodimers which are destroyed and reorganized by proteolytic cleavage during virus release. J Virol 63, 2521–2526.
Yang, M., Ellenberg, J., Bonifacino, J. S. & Weissman, A. M. (1997). The transmembrane domain of a carboxy-terminal anchored protein determines localization to the endoplasmic reticulum. J Biol Chem 272, 1970–1975.
Zhang, W., Chipman, P. R., Corver, J., Johnson, P. R., Zhang, Y., Mukhopadhyay, S., Baker, T. S., Strauss, J. H., Rossmann, M. G. & Kuhn, R. J. (2003a). Visualization of membrane protein domains by cryo-electron microscopy of dengue virus. Nat Struct Biol 10, 907–912.[CrossRef][Medline]
Zhang, Y., Corver, J., Chipman, P. R., Zhang, W., Pletnev, S. V., Sedlak, D., Baker, T. S., Strauss, J. H., Kuhn, R. J. & Rossmann, M. G. (2003b). Structures of immature flavivirus particles. EMBO J 22, 2604–2613.[CrossRef][Medline]
Received 24 July 2009;
accepted 20 October 2009.
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